A two-site phosphorylation system where phosphorylation is catalyzed by the same kniase at both sites but dephosphorylation is catalyzed by different phosphateases. It assumes sequential (de)phosphorylation.
i1 : twoSiteModificationF()
o1 = S_0+E-->X_1
X_1-->S_0+E
X_1-->E+S_1
E+S_1-->X_2
X_2-->E+S_1
X_2-->E+S_2
S_1+F_1-->Y_1
Y_1-->S_1+F_1
Y_1-->S_0+F_1
S_2+F_2-->Y_2
Y_2-->S_2+F_2
Y_2-->S_1+F_2
o1 : ReactionNetwork
|
To rename species, use substitute(ReactionNetwork,List).
The object twoSiteModificationF is a method function.